Free Access
Issue
Math. Model. Nat. Phenom.
Volume 7, Number 1, 2012
Cancer modeling
Page(s) 337 - 368
DOI https://doi.org/10.1051/mmnp/20127115
Published online 25 January 2012
  1. C.J. Creighton, J.L. Bromberg-White, D.E. Misek, D.J. Monsma, F. Brichory, R. Kuick, T.J. Giordano, W. Gao, G.S. Omenn, C.P. Webb, S.M. Hanash. Analysis of tumor-host interactions by gene expression profiling of lung adenocarcinoma xenografts identifies genes involved in tumor formation. Mol Cancer Res., 3 (2005), No. 3, 119–29. [CrossRef] [PubMed] [Google Scholar]
  2. Y. Murakami. Functional cloning of a tumor suppressor gene, TSLC1, in human non-small cell lung cancer. Oncogene, 7 (2002), No. 21(45), 6936–48. [CrossRef] [Google Scholar]
  3. Y. Jiang, L. Cui, T.A. Yie, W.N. Rom, H. Cheng, K.M. Tchou-Wong. Inhibition of anchorage-independent growth and lung metastasis of A549 lung carcinoma cells by IkappaBbeta. Oncogene, 26 (2001), No. 20(18), 2254–63. [CrossRef] [Google Scholar]
  4. M. Soda, et al. Identification of the transforming EML4-ALK fusion gene in non-small cell lung cancer. Nature, 448 (2007), 561–566. [CrossRef] [PubMed] [Google Scholar]
  5. R. Kittler, L. Pelletier, A.K. Heninger, M. Slabicki, M. Theis, L. Miroslaw, I. Poser, S. Lawo, H. Grabner, K. Kozak, J. Wagner, V. Surendranath, C. Richter, W. Bowen, A.L. Jackson, B. Habermann, A.A. Hyman, F. Buchholz. Genome-scale RNAi profiling of cell division in human tissue culture cells. Nat Cell Biol., 9 (2007), No. 12, 1401–12. [CrossRef] [PubMed] [Google Scholar]
  6. M.A. Pujana, J.D. Han, L.M. Starita, K.N. Stevens, M. Tewari, J.S. Ahn, G. Rennert, V. Moreno, T. Kirchhoff, B. Gold, V. Assmann, W.M. Elshamy, J.F. Rual, D. Levine, L.S. Rozek, R.S. Gelman, K.C. Gunsalus, R.A. Greenberg, B. Sobhian, N. Bertin, K. Venkatesan, N. Ayivi-Guedehoussou, X. Sole, P. Hernindez, C. Lazaro, K.L. Nathanson, B.L. Weber, M.E. Cusick, D.E. Hill, K. Offit, D.M. Livingston, S.B. Gruber, J.D. Parvin, M. Vidal. Network modeling links breast cancer susceptibility and centrosome dysfunction. Nat Genet., 39 (2007), No. 11, 1338–49. [CrossRef] [PubMed] [Google Scholar]
  7. M. Vidal. A biological atlas of functional maps. Cell, 9 (2001), No. 104(3), 333–339. [CrossRef] [Google Scholar]
  8. E. Segal, N. Friedman, D. Koller, A. Regev. A module map showing conditional activity of expression modules in cancer. Nat Genet., 36 (2004), No. 10, 1090–1098. [CrossRef] [PubMed] [Google Scholar]
  9. A. Beyer, S. Bandyopadhyay, T. Ideker. Integrating physical and genetic maps : from genomes to interaction networks. Nat Rev Genet., 8 (2007), No. 9, 699–710. [CrossRef] [PubMed] [Google Scholar]
  10. T. Haberichter, B. Mädge, R.A. Christopher, N. Yoshioka, A. Dhiman, R. Miller, R. Gendelman, S.V. Aksenov, I.G. Khalil, S.F. Dowdy. A systems biology dynamical model of mammalian G1 cell cycle progression. Mol Syst Biol., 3 (2007), No. 84. [CrossRef] [Google Scholar]
  11. O. Sahin, C. Löbke, U. Korf, H. Appelhans, Sültmann H, Poustka A, Wiemann S, Arlt D. Combinatorial RNAi for quantitative protein network analysis. Proc Natl Acad Sci U S A., 17 (2007) No. 104(16), 6579–84. [CrossRef] [Google Scholar]
  12. A. 3rd Bankhead, I. Sach, C. Ni, N. LeMeur, M. Kruger, M. Ferrer, R. Gentleman, C. Rohl Knowledge based identification of essential signaling from genome-scale siRNA experiments. BMC Syst Biol., 5 (2009), No. 3 :80. [CrossRef] [Google Scholar]
  13. B. Lehner, C. Crombie, J. Tischler, A. Fortunato, A.G. Fraser. Systematic mapping of genetic interactions in Caenorhabditis elegans identifies common modifiers of diverse signaling pathways. Nat Genet., 38 (2006), No. 8, 896–903. [CrossRef] [PubMed] [Google Scholar]
  14. M. Mukherji, R. Bell, L. Supekova, Y. Wang, A.P. Orth, S. Batalov, L. Miraglia, D. Huesken, J. Lange, C. Martin, S. Sahasrabudhe, M. Reinhardt, F. Natt, J. Hall, C. Mickanin, M. Labow, S.K. Chanda, C.Y. Cho, P.G. Schultz. Genome-wide functional analysis of human cell-cycle regulators. PNAS 103 (2006), No. 40, 14819–14824. [CrossRef] [Google Scholar]
  15. M.H. Beers, Lung Carcinoma. In The Merck manual of diagnosis and therapy (R.S. Porter, and T.V. Jones, editors). Rahway : Merck & Co., Inc. (2008), 2992. [Google Scholar]
  16. A. Jemal, et al. Annual report to the nation on the status of cancer, 1975-2005, featuring trends in lung cancer, tobacco use, and tobacco control. J Natl Cancer Inst, 100 (2008), No. 23, 1672–1694. [CrossRef] [PubMed] [Google Scholar]
  17. R.K. Kancha, N. von Bubnoff, C. Peschel, J. Duyster Functional analysis of epidermal growth factor receptor (EGFR) mutations and potential implications for EGFR targeted therapy. Clin Cancer Res., 15 (2009), No. 2, 460–467. [CrossRef] [PubMed] [Google Scholar]
  18. C.T. Miller, G. Chen, T.G. Gharib, H. Wang, D.G. Thomas, D.E. Misek, T.J. Giordano, J. Yee, M.B. Orringer, S.M. Hanash, D.G. Beer. Increased C-CRK proto-oncogene expression is associated with an aggressive phenotype in lung adenocarcinomas. Oncogene 22 (2003), No. 39, 7950–7957. [CrossRef] [PubMed] [Google Scholar]
  19. A. Zinovyev, E. Viara, L. Calzone, E. Barillot. BiNoM : a Cytoscape plugin for manipulating and analyzing biological networks. Bioinformatics, 24 (2008), No. 6, 876–877. [CrossRef] [PubMed] [Google Scholar]
  20. H. Shigematsu, A.F. Gazdar Somatic mutations of epidermal growth factor receptor signaling pathway in lung cancers. Int J Cancer, 118 (2006), No. 2, 257–262. [CrossRef] [PubMed] [Google Scholar]
  21. C. Mascaux, N. Iannino, B. Martin, M. Paesmans, T. Berghmans, M. Dusart, A. Haller, P. Lothaire, A.P. Meert, S. Noel, J.J. Lafitte, J.P. Sculier. The role of RAS oncogene in survival of patients with lung cancer : a systematic review of the literature with meta-analysis. Br J Cancer., 92 (2005), No. 1, 131–139. [CrossRef] [PubMed] [Google Scholar]
  22. M. Smoot, K. Ono, J. Ruscheinski, P.-L. Wang, T. Ideker. Cytoscape 2.8 : new features for data integration and network visualization. Bioinformatics, 27 (2011), No. 3, 431–432. [CrossRef] [PubMed] [Google Scholar]
  23. Y.M. Chook, G. Blobel. Karyopherins and nuclear import. Curr Opin Struct Biol., 11 (2001), No. 6, 703–715. [CrossRef] [PubMed] [Google Scholar]
  24. B. Lü, J. Xu, Y. Zhu, H. Zhang, M. Lai. Systemic analysis of the differential gene expression profile in a colonic adenoma-normal SSH library. Clin Chim Acta., 378 (2007), No. 1-2, 42–47. [CrossRef] [PubMed] [Google Scholar]
  25. J.W. Park, Y.S. Bae. Phosphorylation of ribosomal protein L5 by protein kinase CKII decreases its 5S rRNA binding activity. Biochem Biophys Res Commun. 263 (1999), No. 2, 475–481. [CrossRef] [PubMed] [Google Scholar]

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